Clarity.PFTFinder¶

Description¶

Custom module for extracting pulmonary function test (PFT) values.

termset Terms:
  ["FEV1", "FEV", "PFT", "pulmonary function test"];

define final PFTTestPatients:
  Clarity.PFTFinder({
    termset:[Terms]
    });

Name	Type	Required	Notes
termset	termset	Yes	List of possible terms to find, e.g. ‘NYHA’
documentset	documentset	No
cohort	cohort	No

Name	Type	Notes
sentence	str	Sentence where measurement is found
start	int	offset of the first character in the matching text
end	int	offset of the final character in the matching text plus 1
fev1_condition	str
fev1_units	str
fev1_value	floats
fev1_text	str
fev1_count	int
fev1_fvc_ratio_count	int
fev1_fvc_condition	str
fev1_fvc_units	str
fev1_fvc_value	float
fev1_fvc_text	str
fvc_count	int
fvc_condition	str
fvc_units	str
fvc_value	float
fvc_text	str

No